An algorithm to robustly detect the timing of gene activation in a timecourse experiment is described in Eser et al 2011 Mol. Cell. Please contact Umut (eser@stanford.edu) for further help with implementation. Click here for download.​

We have developed a state-of-the-art algorithm for yeast segmentation and tracking. The algorithm is described in Doncic et al PLoS ONE 2013. Click here to download the relevant MATLAB files for implementation.​ Contact Andreas for any assistance (doncic@stanford.edu).